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Unraveling the genomic and phylogenetic complexity of the under-studied microfungus Basidiobolus: Insights from 19 newly sequenced genomes
Jasper P Carleton, Alexander J Bradshaw, Liam P Cleary, Madison R Hincher, Kathryn Bushley, Javier F Tabima
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Characterization of a Core Fungal Community and Captivity-Induced Gut “Mycobiome” Change in Fowler’s Toad (Anaxyrus fowleri)
Alexander J Bradshaw, Sinlan Poo, Tracey E Malter, Rylie M Strasbaugh, Brianna Bodner, Madison R Hincher, Anne Devan-Song, Javier F Tabima
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Invasion biology: The golden oyster mushroom in North America
David S Hibbett, Prasanth Prabhu, Javier F Tabima
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First high-quality genome assembly of Umbelopsis nana isolated from forest soil
G3: Genes, Genomes, Genetics
Ryuka Iizuka, Tomohiro Suzuki, Nozomu Watanabe, Javier F Tabima, David Hibbett, Yoko Katayama, Makoto Yoshida
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Draft genome assembly of the green-bronze dung beetle, Onthophagus orpheus
Alexander J Bradshaw, Javier F Tabima, Erin L McCullough
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Ubiquity and diversity of Basidiobolus across amphibian species inhabiting an urbanization gradient
Madison R Hincher, Jasper P Carleton, Sara J Wheeler, Manning DelCogliano, Kaitlyn Mathis, Javier F Tabima
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Impacts on the microbial fungal communities across water, sediment, and amphibian hosts across an urbanization gradient waterway in Worcester, Massachusetts
Sara Jean Wheeler, Manning DelCogliano, Brennan Hare, Alexander James Bradshaw, Madison Rae Hincher, Jasper Perseus Carleton, Philip J Bergmann, Nathan A Ahlgren, Javier Felipe Tabima
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Unraveling the Genomic and Phylogenetic Complexity of the understudied microfungus Basidiobolus: Insights from 19 Newly Sequenced Genomes
Jasper Perseus Carleton, Alexander James Bradshaw, Liam Patrick Cleary, Madison R Hincher, Kathryn E Bushley, Javier Felipe Tabima
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New genomic resources for insect-vectored plant pathogenic fungal species in the Ceratocystidaceae and Ophiostomataceae: Bretziella, Ceratocystis, and Ophiostoma
Catalina Salgado-Salazar, Schyler Nunziata, Shayla Bassingthwaite, Jovana Jonic, Kurt Zeller, Kirk Broders, Yazm’in Rivera, Javier F Tabima
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Differential interactions between calmodulin and the IQ motifs of the HECT E3 ubiquitin ligases UBE3B and UBE3C
PROTEIN SCIENCE
Emily Schaffter, Xiaohuan Lu, Anna E Tinklenberg, Megan R Hill, Rafael H Levin, Javier F Tabima, Shuanghong Huo, Donald E Spratt
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Madison R Hincher, Jasper P Carleton, Sarah J Wheeler, Manning Delcogliano, Kaitlyn A. Mathis, Javier F Tabima Restrepo
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Herptile gut microbiomes: a natural system to study multi-kingdom interactions between filamentous fungi and bacteria
Lluvia Vargas-Gast’elum, Alexander S Romer, Marjan Ghotbi, Jason W Dallas, N Reed Alexander, Kylie C Moe, Kerry L McPhail, George F Neuhaus, Leila Shadmani, Joseph W Spatafora, others
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Climatic variability, spatial heterogeneity and the presence of multiple hosts drive the population structure of the pathogen Phytophthora ramorum and the epidemiology of Sudden Oak Death
Melina Kozanitas, Brian J Knaus, Javier F Tabima, Niklaus J Gr"unwald, Matteo Garbelotto
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Population-level immunologic variation in wild threespine stickleback (Gasterosteus aculeatus)
Fish & Shellfish Immunology
Anika M Wohlleben, Javier F Tabima, N’eva P Meyer, Natalie C Steinel
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Suillus hypogaeus: First record of a truffle Suillus
P’aez, Pi~na, Kyle A Gervers, Jessica A Martin, Javier F Tabima, Daniel L Luoma, Joseph W Spatafora
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A TALE of how a segmented worm makes its nerve cord: Capitella teleta and cell fate specification
INTEGRATIVE AND COMPARATIVE BIOLOGY
Johnny Davila-Sandoval, Javier Tabima, Neva Meyer
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Comparative Genomic Analysis of 31 Phytophthora Genomes Reveals Genome Plasticity and Horizontal Gene Transfer
Molecular Plant-Microbe Interactions
Brent A Kronmiller, Nicolas Feau, Danyu Shen, Javier F Tabima, Shahin S Ali, Andrew D Armitage, Felipe Arredondo, Bryan A Bailey, Stephanie R Bollmann, Angela Dale, others
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First report of Pyricularia oryzae causing gray leaf spot of perennial ryegrass (Lolium perenne L.) in Oregon
Emily Braithwaite, Ruying Wang, Alexander Robert Kowalewski, Javier Tabima, Todd N Temple, Hannah M Rivedal
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First Report of Pyricularia oryzae Causing Gray Leaf Spot of Perennial Ryegrass (Lolium perenne) in Oregon
E Braithwaite, R Wang, A Kowalewski, J F Tabima, T N Temple, H M Rivedal
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The Dictyostelium discoideum genome lacks significant DNA methylation and uncovers palindromic sequences as a source of false positives in bisulfite sequencing
NAR Genomics and Bioinformatics
Robert A Drewell, Tayla C Cormier, Jacob L Steenwyk, James St Denis, Javier F Tabima, Jacqueline M Dresch, Denis A Larochelle
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Rapid new diagnostic LAMP (loop-mediated isothermal amplification) assays to distinguish among the four lineages of Phytophthora ramorum
Kelsey L Sondreli, Javier F Tabima, Jared M LeBoldus
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Exploring Gene Expression Patterns and Evolutionary Responses in Host-Parasite inteactions: Insights from the Schistocephalus solidus–Threespine stickleback System
Anika M Wohlleben, Javier F Tabima, N’eva P Meyer, Natalie C Steinel
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Secreted effector proteins of poplar leaf spot and stem canker pathogen Sphaerulina musiva manipulate plant immunity and contribute to virulence in diverse ways
Molecular Plant-Microbe Interactions
Yao Zhao, Xinyue Zheng, Javier F Tabima, Sheng Zhu, Kelsey L Sondreli, Hope Hundley, Diane Bauer, Kerrie Barry, Yaxin Zhang, Jeremy Schmutz, others
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Fungal species and populations in a genomic perspective
University of Georgia Plant Pathology Seminar series
University of Georgia
Sponsored by University of Georgia
Javier F Tabima Restrepo
-
Fungal and oomycete populations and the boundaries of species
Seminar Series: University of Richmond
University of Richmond, VA
Sponsored by University of Richmond, VA
Javier F Tabima Restrepo
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Evolution and epidemiology of global populations of nursery-associated Agrobacterium
Alexandra Weisberg, II, Edward Davis, Javier Tabima, Melodie Putnam, Marilyn Miller, Michael Belcher, Niklaus Gr"unwald, Walt Ream, Erh-Min Lai, Chih-Horng Kuo, others
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Identity and pathogenicity of fungi associated with root, crown, and vascular symptoms related to winter squash yield decline
Hannah M Rivedal, Javier F Tabima, Alexandra G Stone, Kenneth B Johnson
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Genetic diversity and aggressiveness of Fusarium virguliforme isolates across the midwestern United States
Phytopathologytextregistered
Rodrigo A Olarte, Rebecca Hall, Javier F Tabima, Dean Malvick, Kathryn Bushley
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Tolypocladamide H and the proposed tolypocladamide NRPS in Tolypocladium species
Journal of Natural Products
Richard M Tehan, Rheannon R Blount, Ryan L Goold, Daphne R Mattos, Nicolas R Spatafora, Javier F Tabima, Romina Gazis, Chengshu Wang, Jane E Ishmael, Joseph W Spatafora, others
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Genome Sequence of the Estuarine Synechococcus sp. Strain NB0720_010
Microbiology Resource Announcements
Campbell A MacKenzie, Marcia F Marston, Javier F Tabima, Nathan A Ahlgren
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Tolypocladamide H and the Proposed Tolypocladamide NRPS in Tolypocladium Species
Journal of Natural Products
Richard M. Tehan, Rheannon R. Blount, Ryan L. Goold, Daphne R. Mattos, Nicolas R. Spatafora, Javier F. Tabima, Romina Gazis, Chengshu Wang, Jane E. Ishmael, Joseph W. Spatafora, Kerry L. McPhail
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Swedish University of Agricultural Sciences (SLU, Sveriges lantbruksuniversitet)
Invited Seminar Series
Murfreesboro, Tennessee
Sponsored by Middle Tennessee State University
Javier F Tabima Restrepo
-
Fungal and oomycete populations and the boundaries of species
Seminar Series: Plant Pathology department
Penn State University
Sponsored by Penn State University
Javier F Tabima Restrepo
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Genome Sequence of Estuarine Synechococcus sp. NB0720_010
Microbiology Resource Announcements
Campbell McKenzie, Javier F Tabima Restrepo, Nathan A Ahlgren
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Molecular phylogenomics and population structure of Phytophthora pluvialis
Javier F Tabima, Lilah Gonen, Mireia G’omez-Gallego, Preeti Panda, Niklaus J Gr"unwald, Everett M Hansen, Rebecca McDougal, Jared M LeBoldus, Nari M Williams
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The type VI secretion system of Xanthomonas phaseoli pv. manihotis is involved in virulence and in vitro motility
Nathaly Benavides, Alejandro Alvarez, Mario L Arrieta-Ortiz, Luis Miguel Rodriguez-R, David Botero, Javier Felipe Tabima, Luisa Castiblanco, Cesar Trujillo, Silvia Restrepo, Adriana Bernal
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Identity and pathogenicity of fungi associated with root, crown and vascular symptoms related to winter squash yield decline
Hannah M Rivedal, Javier Felipe Tabima, Alexandra G Stone, Ken Johnson
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Genetic diversity and aggressiveness of Fusarium virguliforme isolates across the Midwestern United States
Rodrigo A Olarte, Rebecca Hall, Javier Tabima, Dean Malvick, Kathryn Bushley
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The type VI secretion system of Xanthomonas phaseoli pv. manihotis is involved in virulence and in vitro motility
Benavides, Montenegro, B, Alejandro Alvarez, Mario L Arrieta-Ortiz, Luis Miguel Rodriguez-R, David Botero, Javier Felipe Tabima, Luisa Castiblanco, Cesar Trujillo, Silvia Restrepo, Adriana Bernal
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QTL analysis of adult plant resistance to stripe rust in a winter wheat recombinant inbred population
Kali M Brandt, Xianming Chen, Javier F Tabima, Deven R See, Kelly J Vining, Robert S Zemetra
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Data from: Mitotic recombination and rapid genome evolution in the invasive forest pathogen Phytophthora ramorumm
Angela L Dale, Nicolas Feau, Sydney E Everhart, Braham Dhillon, Barbara Wong, Julie Sheppard, Guillaume J Bilodeau, Avneet Brar, Javier F Tabima, Danyu Shen, others
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Spatial genetic structure of the insect-vectored conifer pathogen Leptographium wageneri suggests long distance gene flow among Douglas-fir plantations in western Oregon
Frontiers in Forests and Global Change
Patrick I Bennett, Javier F Tabima, Anna L Leon, John Browning, Michael J Wingfield, Jared M LeBoldus
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The type VI secretion system of Xanthomonas phaseoli pv. manihotis is involved in virulence and in vitro motility
David Botero, Javier Felipe Tabima, Luisa Castiblanco, Cesar Trujillo, Silvia Restrepo, Adriana Bernal
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March
2021
Vol. 10
Issue #3
Kali M Brandt, Xianming Chen, Javier F Tabima Restrepo, Deven R See, Kelly J Vining, Robert S Zemetra
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The intricacies of the genome of a small, gut associated fungus: Basidiobolus (Basidiobolaceae, Zoopagomycota)
Winter Bioinformatics School
Bogota, Colombia
Sponsored by Universidad del Rosario
Javier F Tabima Restrepo
-
The intricacies of the genome of a small, gut associated fungus: Basidiobolus (Basidiobolaceae, Zoopagomycota)
Invited Seminar Series
Uppsala, Sweden
Sponsored by Swedish University of Agricultural Sciences (SLU, Sveriges lantbruksuniversitet)
Javier F Tabima Restrepo
-
Pathogenicity and phylogenetic relationships of fungi associated with root, crown and vascular symptoms related to winter squash yield decline
Hannah M Rivedal, Alexandra G Stone, Javier F Tabima, Kenneth B Johnson
-
“Spatial genetic structure of the insect-vectored conifer pathogen Leptographium wageneri suggests long distance gene flow among Douglas-fir plantations in western Oregon
Frontiers in Forests and Global Change
Patrick Bennett, Javier F Tabima Restrepo, Anna Leon, John Browning, Michael John Wingfield, Jared Michael LeBoldus
-
Unexpected conservation and global transmission of agrobacterial virulence plasmids
2020
Vol. 368
Issue #6495
Alexandra J Weisberg, Edward W Davis, Javier Tabima, Michael S Belcher, Marilyn Miller, Chih-Horng Kuo, Joyce E Loper, Niklaus J Gr\"unwald, Melodie L Putnam, Jeff H Chang
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Genome-wide increased copy number is associated with emergence of dominant clones of the Irish potato famine pathogen Phytophthora infestans
Brian J Knaus, Javier F Tabima, Shankar K Shakya, Howard S Judelson, Niklaus J Gr\"unwald
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Molecular phylogenomics and population structure of Phytophthora pluvialis
Javier Tabima, Lilah Gonen, Mireia G\’omez-Gallego, Preeti Panda, Niklaus J Gr\"unwald, Rebecca McDougal, Everett Hansen, Jared Leboldus, Nari M Williams
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Phylogenomic Analyses of Non-Dikarya Fungi Supports Horizontal Gene Transfer Driving
G3 (Bethesda, Md.), 10 (9)
Javier F Tabima, Ian A Trautman, Ying Chang
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Short title: Amazonian Cordyceps of Orthopterida Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto) Tatiana Sanjuan Laboratorio de Taxonom’ia y Ecolog’ia de Hongos, Universidad de Antioquia, calle 67 No. 53–
Javier Tabima, Silvia Restrepo, Thomas Laessoe, Joseph W Spatafora, Ana Esperanza Franco-Molano
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From genomes to forest management–tackling invasive Phytophthora species in the era of genomics
Canadian Journal of Plant Pathology
S Keri"o, H A Daniels, M G’omez-Gallego, J F Tabima, R R Lenz, K L Sondreli, NJ Gr"unwald, N Williams, R Mcdougal, J M LeBoldus
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Population Genomic Analyses Reveal Connectivity via Human-Mediated Transport across Populus Plantations in North America and an Undescribed Subpopulation of Sphaerulina musiva
Molecular Plant-Microbe Interactions
J F Tabima, K L Sondreli, S Keri"o, N Feau, M L Sakalidis, R C Hamelin, J M LeBoldus
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Genomic investigation of the strawberry pathogen Phytophthora fragariae indicates pathogenicity is associated with transcriptional variation in three key races
Frontiers in Microbiology
Thomas M Adams, Andrew D Armitage, Maria K Sobczyk, Helen J Bates, Javier F Tabima, Brent A Kronmiller, Brett M Tyler, Niklaus J Gr"unwald, Jim M Dunwell, Charlotte F Nellist, others
-
Phylogenomic analyses of non-Dikarya fungi supports horizontal gene transfer driving diversification of secondary metabolism in the amphibian gastrointestinal symbiont, Basidiobolus
Javier Felipe Tabima, Ian Trautman, Ying Chang, Yan Wang, Stephen Mondo, Asaf Salamov, Igor Grigoriev, Jason Stajich, Joseph Spatafora
-
effectR: An expandable R package to predict candidate RxLR and CRN effectors in oomycetes using motif searches
Molecular Plant-Microbe Interactions
Javier F Tabima, Niklaus J Gr"unwald
-
Mitotic recombination and rapid genome evolution in the invasive forest pathogen Phytophthora ramorum
Angela L Dale, Nicolas Feau, Sydney E Everhart, Braham Dhillon, Barbara Wong, Julie Sheppard, Guillaume J Bilodeau, Avneet Brar, Javier F Tabima, Danyu Shen, others
-
Genome-wide increased copy number is associated with emergence of super-fit clones of the Irish potato famine pathogen Phytophthora infestans
Brian J Knaus, Javier F Tabima, Shankar K Shakya, Howard S Judelson, Niklaus J Gr"unwald
-
Designing a Socio-Cultural Approach for Teaching and Learning Computational Thinking
Nordic Journal of Digital Literacy
Francisco Buitrago-Fl’orez, Giovanna Danies, Javier Tabima, Silvia Restrepo, Carola Hern’andez
-
Mitotic recombination and rapid genome evolution in the invasive forest pathogen Phytophthora ramorum. MBio 10: e02452-18
A L Dale, N Feau, S E Everhart, B Dhillon, B Wong, J Sheppard, G J Bilodeau, A Brar, J F Tabima, D Shen, others
-
Genetic diversity of Phytophthora pluvialis, a pathogen of conifers, in New Zealand and the west coast of the United States of America
S Brar, J F Tabima, R L McDougal, P-Y Dupont, N Feau, R C Hamelin, P Panda, J M LeBoldus, NJ Gr"unwald, E M Hansen, others
-
Phytophthora betacei, a new species within Phytophthora clade 1c causing late blight on Solanum betaceum in Colombia
Persoonia: Molecular Phylogeny and Evolution of Fungi
M F Mideros, D A Turissini, N Guayaz’an, H Ibarra-Avila, G Danies, M C’ardenas, K Myers, J Tabima, E M Goss, A Bernal, others
-
Populations of Phytophthora rubi show little differentiation and high rates of migration among states in the Western United States
Molecular Plant-Microbe Interactions
Javier F Tabima, Michael D Coffey, Inga A Zazada, Niklaus J Gr"unwald
-
Evolution of the US biological select agent Rathayibacter toxicus
Edward W Davis, Javier F Tabima, Alexandra J Weisberg, Lucas Dantas Lopes, Michele S Wiseman, Michael S Wiseman, Tal Pupko, Michael S Belcher, Aaron J Sechler, Matt A Tancos, others
-
Copy number variation appears increased in clonal lineages over sexual lineages of Phytophthora infestans
International Congress of Plant Pathology (ICPP) 2018: Plant Health in A Global Economy
Brian J Knaus, Javier Tabima, Shankar Shakya, Howard S Judelson, Niklaus J Grunwald
-
effectR: An expandable R package to predict candidate effectors
Javier F Tabima, Niklaus J Gr"unwald
-
Whole genome sequences of the raspberry and strawberry pathogens Phytophthora rubi and P. fragariae
Molecular Plant-Microbe Interactions
Javier F Tabima, Brent A Kronmiller, Caroline M Press, Brett M Tyler, Inga A Zasada, Niklaus J Gr"unwald
-
Population Genomics in R
2017 APS Annual Meeting
Niklaus Grunwald, Steve Klosterman, Brian J Knaus, Javier Tabima
-
SNP-based differentiation of Phytophthora infestans clonal lineages using locked nucleic acid probes and high-resolution melt analysis
Zachariah R Hansen, Brian J Knaus, Javier F Tabima, Caroline M Press, Howard S Judelson, Niklaus J Gr"unwald, Christine D Smart
-
Loop-mediated isothermal amplification for detection of the tomato and potato late blight pathogen, P hytophthora infestans
Journal of Applied Microbiology
Z R Hansen, B J Knaus, J F Tabima, C M Press, H S Judelson, NJ Gr"unwald, Christine D Smart
-
Evolutionary history of the group formerly known as protists using a phylogenomics approach
Revista de la Academia Colombiana de Ciencias Exactas, F’isicas y Naturales
Silvia Restrepo, Juan Enciso, Javier Tabima, Diego Mauricio Ria~no-Pach’on
-
Gall-ID: tools for genotyping gall-causing phytopathogenic bacteria
II, Davis, Alexandra J Weisberg, Javier F Tabima, Niklaus J Grunwald, Jeff H Chang
-
Microbe-ID: an open source toolbox for microbial genotyping and species identification
Javier F Tabima, Sydney E Everhart, Meredith M Larsen, Alexandra J Weisberg, Zhian N Kamvar, Matthew A Tancos, Christine D Smart, Jeff H Chang, Niklaus J Gr"unwald
-
Genomic analyses of dominant US clonal lineages of Phytophthora infestans reveals a shared common ancestry for clonal lineages US11 and US18 and a lack of recently shared ancestry among all other US lineages
B J Knaus, J F Tabima, C E Davis, H S Judelson, NJ Gr"unwald
-
A Covert Operation by a Plant Pathogen
Jeff H Chang, Javier F Tabima
-
Ecological speciation within the Phytophthora genus
Maria F Mideros, David A Turissini, Natalia Guayazan, Giovanna Danies, Martha Cardenas, Kevin Myers, Javier Tabima, Erica M Goss, Adriana Bernal, Luz E Lagos, others
-
What is a clone? Rethinking the ancestry of US clonal lineages of Phytophthora infestans using whole genome sequences
PHYTOPATHOLOGY
B Knaus, J Tabima, Z Kamvar, C Davis, H Judelson, N Grunwald
-
Searching for genomic signatures of host jumping onto raspberry and strawberry in two Phytophthora sister taxa
PHYTOPATHOLOGY
J Tabima, B Kronmiller, B Knaus, C Press, I Zasada, B Tyler, N Grunwald, D Shen
-
Five new species of entomopathogenic fungi from the Amazon and evolution of neotropical Ophiocordyceps
Tatiana I Sanjuan, Ana E Franco-Molano, Ryan M Kepler, Joseph W Spatafora, Javier Tabima, A’ida M Vasco-Palacios, Silvia Restrepo
-
Chapter: Application of genome studies of coffee rust
Published by Springer, Cham
2014
Marco Cristancho, William Giraldo, David Botero, Javier Tabima, Diana Ortiz, Alejandro Peralta, ‘Alvaro Gait’an, Silvia Restrepo, Diego Ria~no
-
Entomopathogens of Amazonian stick insects and locusts are members of the Beauveria species complex (Cordyceps sensu stricto)
Tatiana Sanjuan, Javier Tabima, Silvia Restrepo, Thomas Laessoe, Joseph W Spatafora, Ana Esperanza Franco-Molano
-
Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
Zhian N Kamvar, Javier F Tabima, Niklaus J Gr"unwald
-
The Irish potato famine pathogen Phytophthora infestans originated in central Mexico rather than the Andes
Proceedings of the National Academy of Sciences
Erica M Goss, Javier F Tabima, David EL Cooke, Silvia Restrepo, William E Fry, Gregory A Forbes, Valerie J Fieland, Martha Cardenas, Niklaus J Gr"unwald
-
Pathogenicity, fungicide resistance, and genetic variability of Phytophthora rubi isolates from raspberry (Rubus idaeus) in the western United States
Jane E Stewart, Duncan Kroese, Javier F Tabima, Meredith M Larsen, Valerie J Fieland, Caroline M Press, Inga A Zasada, Niklaus J Gr"unwald
-
Speciation in fungal and oomycete plant pathogens
Annual review of phytopathology
Silvia Restrepo, Javier F Tabima, Maria F Mideros, Niklaus J Gr"unwald, Daniel R Matute
-
Chapter: Phytophthora ramorum
Published by Springer, Berlin, Heidelberg
2014
Sydney E Everhart, Javier F Tabima, Niklaus J Gr"unwald
-
Annotation of a hybrid partial genome of the coffee rust (Hemileia vastatrix) contributes to the gene repertoire catalog of the Pucciniales
Frontiers in plant science
Marco A Cristancho, David Octavio Botero-Rozo, William Giraldo, Javier Tabima, Diego Mauricio Ria~no-Pach’on, Carolina Escobar, Yomara Rozo, Luis F Rivera, Andr’es Dur’an, Silvia Restrepo, others
-
Polyphasic characterization of Colletotrichum sp. Isolates from tree tomato and mango crops in Cundinamarca and Tolima, Colombia
Mendoza, Calder’on, others
-
Identification of pathogenesis-related proteins in the coffee rust, Hemileia vastatrix.
25th International Conference on Coffee Science, ASIC 2014, Armenia, Colombia, 8-13 September 2014
M Cristancho, W Giraldo, J Tabima, D Botero, D Ria~no, S Restrepo, A Gait’an, others
-
Poppr: an R package for genetic analysis of populations with clonal or partially clonal reproduction
Zhian N Kamvar, Javier F Tabima, Niklaus J Gr"unwald
-
Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction.
Z N Kamvar, J F Tabima, NJ Gr"unwald
-
Seborrheic dermatitis: predisposing factors and ITS2 secondary structure for Malassezia phylogenic analysis
Yulien Amado, Anelvi Pati~no-Uzc’ategui, Maria C Garc’ia, Javier Tabima, Adriana Motta, Martha C’ardenas, Adriana Bernal, Silvia Restrepo, Adriana Celis
-
Genomic survey of pathogenicity determinants and VNTR markers in the cassava bacterial pathogen Xanthomonas axonopodis pv. manihotis strain CIO151
Mario L Arrieta-Ortiz, Luis M Rodr’iguez-R, Alvaro L Perez-Quintero, Lucie Poulin, Ana C D’iaz, Nathalia Arias Rojas, Cesar Trujillo, Mariana Restrepo Benavides, Rebecca Bart, Jens Boch, others
-
The poppr R package for genetic analysis of populations with mixed (clonal/sexual) reproduction
Zhian N Kamvar, J F Tabima, Niklaus J Gr"unwald
-
Defining species boundaries in the genus Phytophthora: the case of Phytophthora andina A response to ‘Phytophthora andina sp. nov., a newly identified heterothallic pathogen of solanaceous hosts in the Andean highlands’(Oliva et al., 2010)
M C’ardenas, J Tabima, W E Fry, NJ Gr"unwald, A Bernal, S Restrepo
-
Phytophthora infestans population structure: A worldwide scale
Acta Biol’ogica Colombiana
Martha Cardenas, Giovanna Danies, Javier Tabima, Adriana Bernal, Silvia Restrepo
-
The dynamics of evolution in Phytopththora infestans as told by phylogeographical approaches
PHYTOPATHOLOGY
J Tabima, M Mideros, A Bernal, P Jimenez, D Riano-Pachon, N Grunwald, S Restrepo
-
Morphological characterization of Colletotrichum species isolated from mango and tree tomato in Cundinamarca and Tolima, Colombia
Phytopathology
C Calder’on, M C’ardenas, S Restrepo, P Jim’enez
-
Fusarium species associated to onychomycoses in Colombia.
Marcela Guevara, Angela Mu~noz, Yulien Amado, Laura Bocanegra, Leticia Sopo, Adriana Motta, Maria Garc’ia, Javier Tabima, Silvia Restrepo, Adriana Celis
-
Phylogeography and molecular epidemiology of Papaya ringspot virus
XA Olarte Castillo, G Fermin, J Tabima, Y Rojas, P F Tennant, M Fuchs, R Sierra, A J Bernal, S Restrepo
-
Virulence gene expression in Malassezia spp from individuals with seborrheic dermatitis
Journal of investigative dermatology
MfLipl Mg13326
-
First report of Phytophthora infestans causing late blight on Solanum viarum in Colombia
ME C’ardenas, E Medina, J Tabima, A Vargas, C Lopera, A Bernal, S Restrepo
-
Dissecting the function of the DNMT2-homolog (DNMA) in Dictyostelium discoideum
Zaza Gelasvili, Denis A Larochelle, Jacqueline M. Dresch, Maddie Hincher, Javier F Tabima Restrepo, Robert Drewell
