{"id":118,"date":"2025-11-26T11:00:03","date_gmt":"2025-11-26T16:00:03","guid":{"rendered":"https:\/\/www.clarku.edu\/mathematics\/?p=118"},"modified":"2025-12-09T12:02:45","modified_gmt":"2025-12-09T17:02:45","slug":"image-processing-and-drosophila-embryos","status":"publish","type":"post","link":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/","title":{"rendered":"Image Processing and Drosophila Embryos"},"content":{"rendered":"\n<p class=\"is-style-default\"><strong>Logan Bishop-Van Horn, Teodor Nicola-Antoniu<\/strong><\/p>\n\n\n<div style=\"color:inherit\" class=\"eyebrow  has-text-align-left\">Mentor: Jacqueline Dresch<\/div>\n\n\n\n<p class=\"has-small-font-size\">Using raw data from microscope images in modeling gene expression levels presents the researcher with many challenges; one must be able to remove any extraneous information from the image and be able to compare images prepared and taken from different embryos on different days. For this reason, Logan and Teodor\u2019s projects focused on creating a pipeline for processing these images, including noise and background subtraction, normalization, spatial registration, and extraction of quantitative levels of gene expression.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Logan Bishop-Van Horn, Teodor Nicola-Antoniu Using raw data from microscope images in modeling gene expression levels presents the researcher with many challenges; one must be able to remove any extraneous information from the image and be able to compare images prepared and taken from different embryos on different days. For this reason, Logan and Teodor\u2019s [&hellip;]<\/p>\n","protected":false},"author":15,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":"","_links_to":"","_links_to_target":""},"categories":[8],"tags":[],"class_list":["post-118","post","type-post","status-publish","format-standard","hentry","category-student-research"],"yoast_head":"<!-- This site is optimized with the Yoast SEO Premium plugin v28.1 (Yoast SEO v28.5) - https:\/\/yoast.com\/product\/yoast-seo-premium-wordpress\/ -->\n<title>Image Processing and Drosophila Embryos | Mathematics | Clark University<\/title>\n<meta name=\"robots\" content=\"index, follow, max-snippet:-1, max-image-preview:large, max-video-preview:-1\" \/>\n<link rel=\"canonical\" href=\"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/\" \/>\n<meta property=\"og:locale\" content=\"en_US\" \/>\n<meta property=\"og:type\" content=\"article\" \/>\n<meta property=\"og:title\" content=\"Image Processing and Drosophila Embryos\" \/>\n<meta property=\"og:description\" content=\"Logan Bishop-Van Horn, Teodor Nicola-Antoniu Using raw data from microscope images in modeling gene expression levels presents the researcher with many challenges; one must be able to remove any extraneous information from the image and be able to compare images prepared and taken from different embryos on different days. For this reason, Logan and Teodor\u2019s [&hellip;]\" \/>\n<meta property=\"og:url\" content=\"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/\" \/>\n<meta property=\"og:site_name\" content=\"Mathematics\" \/>\n<meta property=\"article:publisher\" content=\"https:\/\/www.facebook.com\/ClarkUniversityWorcester\" \/>\n<meta property=\"article:published_time\" content=\"2025-11-26T16:00:03+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2025-12-09T17:02:45+00:00\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:creator\" content=\"@clarkuniversity\" \/>\n<meta name=\"twitter:site\" content=\"@clarkuniversity\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Jordan Aubin\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"1 minute\" \/>\n<script type=\"application\/ld+json\" class=\"yoast-schema-graph\">{\"@context\":\"https:\\\/\\\/schema.org\",\"@graph\":[{\"@type\":\"Article\",\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/image-processing-and-drosophila-embryos\\\/#article\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/image-processing-and-drosophila-embryos\\\/\"},\"headline\":\"Image Processing and Drosophila Embryos\",\"datePublished\":\"2025-11-26T16:00:03+00:00\",\"dateModified\":\"2025-12-09T17:02:45+00:00\",\"mainEntityOfPage\":{\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/image-processing-and-drosophila-embryos\\\/\"},\"wordCount\":87,\"articleSection\":[\"Student Research\"],\"inLanguage\":\"en-US\"},{\"@type\":\"WebPage\",\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/image-processing-and-drosophila-embryos\\\/\",\"url\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/image-processing-and-drosophila-embryos\\\/\",\"name\":\"Image Processing and Drosophila Embryos | Mathematics | Clark University\",\"isPartOf\":{\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/#website\"},\"datePublished\":\"2025-11-26T16:00:03+00:00\",\"dateModified\":\"2025-12-09T17:02:45+00:00\",\"author\":{\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/#\\\/schema\\\/person\\\/73c3626fe9ff937cd35eb2269f0ed7a2\"},\"inLanguage\":\"en-US\",\"potentialAction\":[{\"@type\":\"ReadAction\",\"target\":[\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/image-processing-and-drosophila-embryos\\\/\"]}]},{\"@type\":\"BreadcrumbList\",\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/wp-json\\\/wp\\\/v2\\\/posts\\\/118#breadcrumbs\",\"itemListElement\":[{\"@type\":\"ListItem\",\"position\":0,\"name\":\"ClarkU\",\"item\":\"https:\\\/\\\/www.clarku.edu\\\/\"},{\"@type\":\"ListItem\",\"position\":1,\"name\":\"Mathematics\",\"item\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\"}]},{\"@type\":\"WebSite\",\"@id\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/#website\",\"url\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/\",\"name\":\"Mathematics\",\"description\":\"\",\"potentialAction\":[{\"@type\":\"SearchAction\",\"target\":{\"@type\":\"EntryPoint\",\"urlTemplate\":\"https:\\\/\\\/www.clarku.edu\\\/mathematics\\\/?s={search_term_string}\"},\"query-input\":{\"@type\":\"PropertyValueSpecification\",\"valueRequired\":true,\"valueName\":\"search_term_string\"}}],\"inLanguage\":\"en-US\"}]}<\/script>\n<!-- \/ Yoast SEO Premium plugin. -->","yoast_head_json":{"title":"Image Processing and Drosophila Embryos | Mathematics | Clark University","robots":{"index":"index","follow":"follow","max-snippet":"max-snippet:-1","max-image-preview":"max-image-preview:large","max-video-preview":"max-video-preview:-1"},"canonical":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/","og_locale":"en_US","og_type":"article","og_title":"Image Processing and Drosophila Embryos","og_description":"Logan Bishop-Van Horn, Teodor Nicola-Antoniu Using raw data from microscope images in modeling gene expression levels presents the researcher with many challenges; one must be able to remove any extraneous information from the image and be able to compare images prepared and taken from different embryos on different days. For this reason, Logan and Teodor\u2019s [&hellip;]","og_url":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/","og_site_name":"Mathematics","article_publisher":"https:\/\/www.facebook.com\/ClarkUniversityWorcester","article_published_time":"2025-11-26T16:00:03+00:00","article_modified_time":"2025-12-09T17:02:45+00:00","twitter_card":"summary_large_image","twitter_creator":"@clarkuniversity","twitter_site":"@clarkuniversity","twitter_misc":{"Written by":"Jordan Aubin","Est. reading time":"1 minute"},"schema":{"@context":"https:\/\/schema.org","@graph":[{"@type":"Article","@id":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/#article","isPartOf":{"@id":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/"},"headline":"Image Processing and Drosophila Embryos","datePublished":"2025-11-26T16:00:03+00:00","dateModified":"2025-12-09T17:02:45+00:00","mainEntityOfPage":{"@id":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/"},"wordCount":87,"articleSection":["Student Research"],"inLanguage":"en-US"},{"@type":"WebPage","@id":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/","url":"https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/","name":"Image Processing and Drosophila Embryos | Mathematics | Clark University","isPartOf":{"@id":"https:\/\/www.clarku.edu\/mathematics\/#website"},"datePublished":"2025-11-26T16:00:03+00:00","dateModified":"2025-12-09T17:02:45+00:00","author":{"@id":"https:\/\/www.clarku.edu\/mathematics\/#\/schema\/person\/73c3626fe9ff937cd35eb2269f0ed7a2"},"inLanguage":"en-US","potentialAction":[{"@type":"ReadAction","target":["https:\/\/www.clarku.edu\/mathematics\/image-processing-and-drosophila-embryos\/"]}]},{"@type":"BreadcrumbList","@id":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/posts\/118#breadcrumbs","itemListElement":[{"@type":"ListItem","position":0,"name":"ClarkU","item":"https:\/\/www.clarku.edu\/"},{"@type":"ListItem","position":1,"name":"Mathematics","item":"https:\/\/www.clarku.edu\/mathematics"}]},{"@type":"WebSite","@id":"https:\/\/www.clarku.edu\/mathematics\/#website","url":"https:\/\/www.clarku.edu\/mathematics\/","name":"Mathematics","description":"","potentialAction":[{"@type":"SearchAction","target":{"@type":"EntryPoint","urlTemplate":"https:\/\/www.clarku.edu\/mathematics\/?s={search_term_string}"},"query-input":{"@type":"PropertyValueSpecification","valueRequired":true,"valueName":"search_term_string"}}],"inLanguage":"en-US"}]}},"fimg_url":false,"_links":{"self":[{"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/posts\/118","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/users\/15"}],"replies":[{"embeddable":true,"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/comments?post=118"}],"version-history":[{"count":3,"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/posts\/118\/revisions"}],"predecessor-version":[{"id":193,"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/posts\/118\/revisions\/193"}],"wp:attachment":[{"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/media?parent=118"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/categories?post=118"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.clarku.edu\/mathematics\/wp-json\/wp\/v2\/tags?post=118"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}