Biology

Clark stained glass from Geography building of Biology

Genome–Enabled Biology* (*and other topics) Journal Club

This group meets 1:00-2:00 p.m. on Fridays in Lasry Biosciences 355 to discuss recent publications in evolution, genomics, development and other topics of interest to participants. All are welcome.

For access to papers and other Journal Club news, please subscribe to the Genome–Enabled Biology Moodle course. Log in with your Clark Credentials, select "Participant" (no password or key is needed) and click "Enroll me." Subscribers will be notified of updates automatically by email.

SPRING 2013 TOPIC
Jan 25

Real-time evolution of new genes by innovation, amplification, and divergence. Näsvall et al. 2010 June. Curr Opin Struct Biol 20(3): 330.
Presenter: Laszlo Nagy

Feb 1 MicroRNAs and essential components of the microRNA processing machinery are not encoded in the genome of the ctenophore Mnemiopsis leidyi. Maxwell et al. BMC Genomics 2012, 13:714; doi:10.1186/1471-2164-13-714.
Presenter: Neva Meyer
Feb 8

MEETING CANCELLED DUE TO PREDICTED BLIZZARD -- discussion to be rescheduled at a later date.

Feb 15 Enterotypes of the human gut microbiome. M. Arumugam, et al. doi:10.1038/nature09944
Presenter: Heather Wiatrowski
Feb 22  
Mar 1 The evolutionary landscape of alternative splicing in vertebrate species. Barbosa-Morais et al. 2012. Science 338, 1593.
Perspective: Splicing in 4D. Panagiotis Papasaikas and Juan Valcárcel. 2012. doi:10.1126/science.1233219
Presenter: David Hibbett
Mar 15 A high-coverage genome sequence from an archaic Denisovan individual. Barbosa-Morais et al. . doi:30 August 2012; 10.1126/science.1224344
Presenters: Romina Gazis
Mar 22  
Mar 29


Apr 5 Founder Effects Persist Despite Adaptive Differentiation: A Field Experiment with Lizards. Kolbe et al. 2012. Science. 335: 1086-1089.
Presenter: Alfredo Justo

Apr 12

Adaptive horizontal transfer of a bacterial gene to an invasive insect pest of coffee. Acunaa, et al. PNAS March 13, 2012 vol. 109 no. 11 4197-4202.
Presenter: Dimitris Floudas

Apr 19

Rapid Global Expansion of the Fungal Disease Chytridiomycosis into Declining and Healthy Amphibian Populations. James TY, Litvintseva AP, Vilgalys R, Morgan JAT, Taylor JW, et al. (2009)PLoS Pathog 5(5): e1000458. doi:10.1371/journal.ppat.1000458
Presenter: Jaya Seelan Sathiya Seelan