Department of Biology

John Baker

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John A. Baker

Associate Research Professor
Ph.D., University of Arkansas, 1998
Research Fellow
George Perkins Marsh Institute

Department of Biology
Clark University
15 Maywood St.
Worcester, MA 01610-1477

Office #331; Lab #253
Phone: 508-793-7609
E-mail:

Professional Background & Research Interests:

My research interests focus on the life history and ecology of fishes.egg lumen My early research centered on freshwater stream fishes of the southeastern U.S., but over the last 15 years it has broadened to include my current studies on the adaptive radiation of the stickleback. Life history traits such as offspring size, fecundity, age at reproduction, and patterns of senescence are features of organisms that are especially closely linked to fitness, and freshwater fishes provide outstanding opportunities to understand the relationships between environment and life history evolution. The post-glacial adaptive radiation of the threespine stickleback fish offers particularly unique insights. In addition to life-history traits, my work with threespine stickleback also includes studies on the evolution of anti-predator armoring and related morphological traits.

My interests in fishes have always included an applied component, developed during 12 years of work at the Waterways Experiment Station (Vicksburg MS, U.S. Army Corps of Engineers), and later as an independent consultant. My applied has research concentrated on assessment of the effects of river regulatory practices (water diversions, dams, levees, channel alignment, etc.) on river ecosystems. Additional research interests allied to my stream work have included the ecology of riparian habitats, wetlands, impoundments and estuaries. In this research area, I am currently working on developing biotic inventories for streams and riparian areas within several north-central Massachusetts preserves. All of these interests are reflected in my appointment as a Research Fellow at the George Perkins Marsh Institute.

My teaching at Clark has reflected both sets of interests, as I have taught courses ranging from Ecological Systems and Applied Ecology, to Introductory Biology and Biodiversity. In the spring of 2008 I will teach Ecology and Conservation Biology.

Selected Publications:

Baker, J.A., W.C. Cresko, D.C. Heins and S.A. Foster. 2005. Life-history differentiation of benthic and limnetic ecotypes in a polytypic population of threespine stickleback (Gasterosteus aculeatus). Evolutionary Ecology Research 7:121-131.

Heins, D.C., J.A. Baker, G. DeSilva and E.L. Birden. 2005. Clutch characteristics of two populations of nine-spined stickleback from south-central Alaska. Journal of Fish Biology 67:873-878.

Foster, S.A. and J.A. Baker. 2004. Evolution in parallel: new insights from a classic system. Trends in Ecology and Evolution 19:456-459.

Foster, S.A., J.A. Baker and M.A. Bell. 2003. The case for conserving threespine stickleback populations: protecting an adaptive radiation. Fisheries 28:10-18.

Baker, J.A., S.A. Foster, D.C. Heins, M.A. Bell and R.W. King. 1998. Variation in female life-history traits among Alaskan populations of the threespine stickleback, Gasterosteus aculeatus, L. (Pisces: Gasterosteidae). Biological Journal of the Linnean Society 63:141-159.

Brookes, A., J.A. Baker and C.R. Redmond. 1996. Floodplain restoration and riparian zone management. Pages 201-229 in: Brookes, A. and F.D. Shields (eds.), River channel restoration: guiding principles for sustainable projects. John Wiley & Sons, Chichester, UK.

Heins, D.C., J.A. Baker and D.J. Tylicki. 1996. Reproductive season, clutch size, and egg size of the rainbow darter, Etheostoma caeruleum, from the Homochitto River, Mississippi, with an evaluation of data from the literature. Copeia 1996(4):1005-1010.

Baker, J.A. and D.C. Heins. 1994. Reproductive life history of the North American madtom catfish, Noturus hildebrandi (Bailey & Taylor 1950), with a review of data for the genus. Ecology of Freshwater Fish 3:167-175.

Major Research Grants:

2005: National science Foundation Animal Behavior Program (S.A. Foster P.I., JAB Co-PI). Ancestral Plasticity and Mating System Evolution in the Stickleback Radiation. Funding period January 1 2005- December 31, 2008. REU supplements 2005, 2006, 2007 $18,000 in total to date.