Biochemistry and Molecular Biology

Protein electrophoresis gel

Undergraduate Research

Honors Theses

2012


Jenni Adams - "Understanding the function of KIFAP3 and its possible role in ALS"

Jennifer Gaines - "Study of the Self-Assembly of the Amyloid-B42 Protein in the presence of Rifamycin SV"

Abhijit Srungavarapu
- "Gene Delivery VIA Funtionalized Poly(Ethylene Imine)-DNA Poly- Plexes"

2011

Priyanka Kapur "RBP Mediated Post-Transcriptional Regulation of Nitrate Reductase in Thalassiosira pseudonana"

Jason Lui "Characterization of D. discoideum Rad4"

2010

Jasmin Abraham "Biochemical and Genetic Analysis of Octopamine Biosynthesis"

Di Deng   "The Role of Stomatin in GluT1 Function and Regulation"

Tara Deveraj   "Histone Deacetylase Inhibitors SAHA and MS-275 Differentially Induce Survival Motor Neuron 2 Gene Expression"

2009

Timothy Hanley "Drug Resistance in a Haploid Vertebrate Cell Line"

Dushani Palliyaguru "Insulin Receptor Substrate 2 (IRS-2) Regulates Apelin Gene Expression in Mammary Tumor Cell Lines"

2008

Shymal Asher "Is N Terminal Dimerization of HSP90 Necessary for Function?"

Saima Chaudhry "Elucidation of the Folding and Aggregation of the Amyloid ?-Protein by Diglycine Scanning Mutagenesis"

Daniel Hidalgo "Characterization of a new PLC-gamma Mutation in Drosophila melanogaster"

Lincoln Muhoro "Structural Basis of Epidermolysis Bullosa (EB): Insights from Biophysical Studies of Keratin Intermediate Filament (KIF) Peptides"

Academic Spree Day Presentations

2012


Jenni Adams '12
- Cloning and Cellular Characterization of KIFAP3 Splice Isoforms (in collaboration with Matt Stigliano, graduate student, UMASS Medical School; Sponsors Professor David Thurlow, Clark University & Professor John Landers UMASS Medical School)

Jennifer Gaines '12
- NMR Studies of Amyloid Beta Protein Aggregation in the Presence of Rifamycin SV (sponsor: Professor Noel Lazo)

Abhijit Srungavarapu '12
- New gene delivering polymers based on PEI copolymers modified via "click chemistry" (in collaboration with Robert P. Doyle, graduate student; sponsor: Professor David Thurlow)

2011

Jenni Adams '12 "ALS and the Search for a KIFAP3 Interaction Protein (sponsor:  Professor John Landers [UMass Medical School] and Professor David Thurlow)

Kristen Murrone '11 "Sentinel Events Model:  Phase 3 Study at UMass Medical School" (sponsor:  Professor David Thurlow)

Abhijit Srungavarapu '12 "G-Priming Activity of the Primase T7 Chimera" (sponsor:  Professor David Thurlow, and in collaboration with Jamie Towle, graduate student)

Dan Moynihan '11 "Biophysical Studies of the Effects of the Italian Mutation on the Self-Assembly of the Amyloid-β Protein" (sponsor:  Professor Noel Lazo)

Jason Lui '11 "Knockout of Rad4 DNA Repair Gene in Dictyostelium discoideum" (sponsor:  Professor Denis Larochelle)

2010

Kyle Denton '11   "Development of a Genetic System for Denitrovibrio acetiphilus (sponsor:  Professor Heather Wiatrowski)

Serena Pham '11   "Biogenic Amines-Gated Chloride Channels' Roles in C. elegans Behaviors (sponsor:  Professor Noel Lazo)

Corri Stewart '10   "A Comparison of Mercury and Chromate Responses in Shewanella Pmeodemsos (MR-1) (sponsor:  Professor Heather Wiatrowski)

2009

Lisa Crislip '09 "Chimeric primase-helicases in mitochondrial DNA replication" (in collaboration with Jamie Towle, graduate student; sponsor:  Professor Donald Crampton)

Mary Abdalla '09 and Yennhi Nguyen '09 "Discovery of Bacteriophage specific for Streptococcus mutans" (sponsor:  Professor Donald Crampton)

Chatura Jayakody '10 "Insight into protein purification" (sponsor:  Professor David Thurlow)

Molly Brennan '09 "Effects of neonatal tactile stimulation on social behavior" (sponsors:  Professor David Thurlow, Clark U. and Dr. Jun Xu, Tufts Veterinary School of Medicine)

2008

Laura Andersh '08 "Characterizing the structure/function of Glut1 using Factor Xa Proteolysis" (in collaboration with Julie De Zutter, graduate student; sponsors:  Professor David Thurlow, Clark U. and Anthony Carruthers, UMass Medical School)

Laura Andersh '08 "Cloning, expression, and purification of LMA glycoprotein" (sponsor:  Professor David Thurlow)

Annette Nelkenbaum '09 "Metastasis in liver cancer" (sponsors:  Professor David Thurlow, Clark U. and Brian Lewis, UMass Medical School)

Dushani Palliyaguru '09 "Role of insulin receptor protein-2 (IRS-2) in regulation of apelin in breast cancer metastasis"  (sponsors:  Professor David Thurlow, Clark U. and Leslie Shaw, UMass Medical School)

Shymal Asher '08 "Is N-terminal dimerization of Hsp90 necessary for its function?" (sponsors: Profesor Daivd Thurlow, Clark U. and Dan Bolon, UMass Medical School)

Lincoln Muhoro '08 "Oligosaccharide assay precision on mAb1 and evaluation of CEM microwave technology" (sponsors: Professor David Thurlow, Clark U. and David Ouellette, Abbott Bioresearch Center)

Fall Fest Presentations

2010

Hakeem Hindi '11 - Elucidation of Amyloid-beta Protein Folding and Self-assembly by Studies of Double Mutants. (sponsor: Professor Noel Lazo)

Jon Imeraj '11 and Maria Luisa Sandoval '11 - Expression of Lysyl Oxidase in E. coli. (sponsor: Professor Frederick Greenaway)

Craig Jeskey '11 - Cloning Single-Stranded DNA Protein For in vitro Replisome Reconstruction. (in collaboration with: Jamie Towle, graduate student; sponsor: Professor Donald Crampton)

Priyanka Kapur '11 - Post-Transcriptional Gene Regulation of Marine Diatoms. (sponsor: Professor Deborah Robertson)

Sang A. Kim '11 - Inhibition of Amyloid-beta aggregation with small molecules: mechanistic studies. (in collaboration with: Kevin Robbins, graduate student; sponsor: Professor Noel Lazo)

Abhijit Srungavarapu '12 - Ion transport through polymer matrices: towards more efficient rechargeable lithium batteries. (sponsor: Professor Sergio Granados-Focil)

2009

Kyle Denton '10 "Identification of an Unknown Anaerobic Bacteria" (sponsor:  Professor Heather Wiatrowski

Corri Stewart '10 "Growth Trends in Shewanella Oneidensis in Potassium Chromate and Mercuric Chloride (sponsor:  Professor Heather Wiatrowski)

2008

Dmitry Merzon '09 "Antibodies as tools to study Fanconi Anemia" (sponsors:  Professor David Thurlow, Clark U. and Alan D’Andrea, Dana Farber Cancer Institute)

Chatura Jayakody '10 "Purification of protein of interest" (sponsors:  Professor David Thurlow, Clark U. and Scott Gridley, BlueSky Biotech)

Annette Nelkenbaum '09 "The effects of tumor suppressor gene p16INK4a on transformation phenotypes in HCC"  (sponsors:  Professor David Thurlow, Clark U. and Brian Lewis, UMass)